STRINGSTRING
xr protein (Neurospora crassa) - STRING interaction network
"xr" - Xylose reductase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xrXylose reductase (322 aa)    
Predicted Functional Partners:
EFNCRP00000000677
Putative uncharacterized protein (383 aa)
   
  0.989
EFNCRP00000000635
Putative uncharacterized protein (363 aa)
   
  0.947
EFNCRP00000007012
Putative uncharacterized protein (437 aa)
   
  0.945
EFNCRP00000009362
Putative uncharacterized protein (543 aa)
     
 
    0.873
B21J21.210
Related to xylan 1, 4-beta-xylosidase (774 aa)
     
 
  0.822
EFNCRP00000009502
Putative uncharacterized protein (350 aa)
     
 
  0.774
cys-4
Sulfite reductase beta subunit (1538 aa)
         
  0.678
xyk-1
Putative uncharacterized protein (576 aa)
   
 
  0.658
EFNCRP00000005482
Putative uncharacterized protein (1065 aa)
     
        0.650
12F11.090
Probable TRANSKETOLASE; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (686 aa)
     
 
  0.646
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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