STRINGSTRING
EFNCRP00000006483 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006483" - DNA topoisomerase I in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006483DNA topoisomerase I (874 aa)    
Predicted Functional Partners:
EFNCRP00000006105
DNA topoisomerase 2 (1909 aa)
     
 
  0.983
EFNCRP00000005961
Putative uncharacterized protein (772 aa)
     
      0.904
EFNCRP00000005163
Putative uncharacterized protein (482 aa)
     
      0.903
B7H23.050
Ubiquitin carrier protein (157 aa)
       
  0.760
qde-3
Putative uncharacterized protein (1955 aa)
     
 
  0.748
EFNCRP00000006054
Putative uncharacterized protein (527 aa)
       
 
  0.738
B10C3.100
Putative uncharacterized protein (612 aa)
     
 
  0.649
EFNCRP00000009574
Putative uncharacterized protein (99 aa)
       
  0.635
EFNCRP00000004253
FACT complex subunit spt-16 (1042 aa)
     
 
  0.590
EFNCRP00000005439
DNA polymerase (2262 aa)
     
 
  0.553
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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