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EFNCRP00000006580 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000006580" - Putative RNA polymerase II transcription factor B subunit 1 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000006580Putative RNA polymerase II transcription factor B subunit 1 (663 aa)    
Predicted Functional Partners:
EFNCRP00000005533
Putative uncharacterized protein (475 aa)
     
  0.991
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.986
EFNCRP00000001975
Predicted protein (362 aa)
     
  0.982
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.972
EFNCRP00000001878
Related to transcription factor TFIIH chain p47 (416 aa)
     
  0.972
B2O8.310
Related to basic transcription factor 2 (35 kd SU) (439 aa)
     
  0.972
mus-40
Putative uncharacterized protein (1269 aa)
     
  0.970
B2F7.040
Probable cyclin-dependent ser/thr protein kinase KIN28 (407 aa)
     
  0.965
12F11.030
Predicted protein (353 aa)
     
  0.959
EFNCRP00000004461
Predicted protein (1089 aa)
     
  0.956
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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