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stk-47 protein (Neurospora crassa) - STRING interaction network
"stk-47" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk-47Putative uncharacterized protein (525 aa)    
Predicted Functional Partners:
EFNCRP00000006729
Transcription elongation factor spt-5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1052 aa)
     
  0.981
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.974
EFNCRP00000002793
Putative uncharacterized protein (422 aa)
     
  0.971
EFNCRP00000005143
Putative uncharacterized protein (441 aa)
     
  0.962
B14A6.220
Putative uncharacterized protein (427 aa)
     
  0.881
EFNCRP00000001871
RNA polymerase II holoenzyme cyclin-like subunit (345 aa)
     
  0.813
EFNCRP00000007008
Putative uncharacterized protein (351 aa)
     
  0.801
EFNCRP00000003775
Putative uncharacterized protein (829 aa)
     
  0.794
94C8.120
Predicted protein (392 aa)
     
  0.787
EFNCRP00000002143
Putative uncharacterized protein (298 aa)
       
  0.763
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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