STRINGSTRING
mus-44 protein (Neurospora crassa) - STRING interaction network
"mus-44" - Mating-type switching protein swi10 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mus-44Mating-type switching protein swi10 (405 aa)    
Predicted Functional Partners:
mus-38
Putative uncharacterized protein (957 aa)
     
  0.995
B24N4.100
Putative uncharacterized protein (435 aa)
       
  0.994
EFNCRP00000007371
Crossover junction endonuclease mus-81 (645 aa)
     
  0.951
msh2
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR) (937 aa)
       
 
  0.924
upr-1
DNA polymerase (1926 aa)
     
  0.885
mus-11
DNA repair and recombination protein mus-11 (600 aa)
       
  0.861
mus-40
Putative uncharacterized protein (1269 aa)
     
  0.794
mus-18
UV-damage endonuclease (656 aa)
       
 
  0.786
EFNCRP00000009115
ATP-dependent DNA helicase mph-1 (1168 aa)
       
  0.741
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
 
  0.735
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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