STRINGSTRING
gh10-4 protein (Neurospora crassa) - STRING interaction network
"gh10-4" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gh10-4Predicted protein (445 aa)    
Predicted Functional Partners:
EFNCRP00000004105
Predicted protein (442 aa)
     
        0.654
EFNCRP00000001531
Putative uncharacterized protein (596 aa)
     
        0.616
EFNCRP00000001017
Xylosidase/arabinosidase (328 aa)
 
   
  0.587
EFNCRP00000005735
Predicted protein (505 aa)
     
        0.581
EFNCRP00000005522
Predicted protein (365 aa)
     
        0.550
gh3-2
Putative uncharacterized protein (980 aa)
       
  0.548
EFNCRP00000009109
Predicted protein (192 aa)
     
        0.547
EFNCRP00000001402
Predicted protein (586 aa)
     
        0.519
B23L21.270
Related to spliceosome-associated protein SAP-49 (313 aa)
     
        0.508
aguA
Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan (836 aa)
 
     
  0.502
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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