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xlr-1 protein (Neurospora crassa) - STRING interaction network
"xlr-1" - Transcriptional activator xlnR in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xlr-1Transcriptional activator xlnR (944 aa)    
Predicted Functional Partners:
clr-1
Putative uncharacterized protein (677 aa)
     
   
  0.788
B2E7.100
Putative uncharacterized protein (855 aa)
     
   
  0.767
cbh-1
Exoglucanase 1 (521 aa)
     
   
  0.667
cre-1
DNA-binding protein cre-1 (430 aa)
           
  0.644
B10D6.120
Endo-1,4-beta-xylanase (220 aa)
           
  0.532
gh3-1
Putative uncharacterized protein (827 aa)
           
  0.523
xr
Xylose reductase (322 aa)
           
  0.465
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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