STRINGSTRING
stk-8 protein (Neurospora crassa) - STRING interaction network
"stk-8" - Serine/threonine-protein kinase prk1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk-8Serine/threonine-protein kinase prk1 (557 aa)    
Predicted Functional Partners:
EFNCRP00000001871
RNA polymerase II holoenzyme cyclin-like subunit (345 aa)
     
  0.984
EFNCRP00000003347
Mediator of RNA polymerase II transcription subunit 6 (360 aa)
     
  0.971
EFNCRP00000001609
Mediator of RNA polymerase II transcription subunit 7 (347 aa)
     
  0.971
EFNCRP00000000249
Mediator of RNA polymerase II transcription subunit 10 (253 aa)
     
  0.970
EFNCRP00000006455
Mediator of RNA polymerase II transcription subunit 14 (1211 aa)
       
  0.969
EFNCRP00000000761
Mediator of RNA polymerase II transcription subunit 31 (129 aa)
       
  0.959
EFNCRP00000000568
Mediator of RNA polymerase II transcription subunit 12 (1789 aa)
     
 
  0.946
EFNCRP00000004973
Mediator of RNA polymerase II transcription subunit 21 (137 aa)
       
  0.933
EFNCRP00000002793
Putative uncharacterized protein (422 aa)
     
  0.895
B14A6.220
Putative uncharacterized protein (427 aa)
     
  0.886
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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