STRINGSTRING
hcp-1 protein (Neurospora crassa) - STRING interaction network
"hcp-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcp-1Putative uncharacterized protein (925 aa)    
Predicted Functional Partners:
hpt-1
Predicted protein (145 aa)
       
 
  0.818
B14D6.190
Putative uncharacterized protein (1010 aa)
           
  0.746
ecd-2
Predicted protein (386 aa)
           
  0.745
ecd-1
Putative uncharacterized protein (467 aa)
           
  0.745
ada-6
Predicted protein (733 aa)
           
  0.688
cys-4
Sulfite reductase beta subunit (1538 aa)
   
 
  0.617
EFNCRP00000005310
Putative uncharacterized protein (333 aa)
       
 
  0.589
B23L21.130
Related to AP-1-like transcription factor (577 aa)
       
 
  0.568
EFNCRP00000003630
41 kDa peptidyl-prolyl cis-trans isomerase (375 aa)
     
 
  0.553
cat-3
Catalase-3 (719 aa)
           
  0.538
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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