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gfa1 protein (Neurospora crassa) - STRING interaction network
"gfa1" - Glucosamine-fructose-6-phosphate aminotransferase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfa1Glucosamine-fructose-6-phosphate aminotransferase (690 aa)    
Predicted Functional Partners:
pyr-3
Protein pyrABCN (1832 aa)
   
 
  0.982
aro-1
Pentafunctional AROM polypeptide; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
     
 
  0.981
EFNCRP00000009498
T-complex protein 1 subunit zeta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (544 aa)
       
      0.895
EFNCRP00000005782
Putative uncharacterized protein (2692 aa)
       
 
  0.844
sec53
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (273 aa)
 
   
  0.783
EFNCRP00000005290
Probable proline-tRNA ligase (558 aa)
     
 
  0.762
B24N11.110
60S ribosomal protein L3, mitochondrial (384 aa)
           
  0.760
B2C22.090
Probable positive effector protein GCN20 (749 aa)
     
      0.750
EFNCRP00000009690
Putative uncharacterized protein (1110 aa)
       
 
  0.745
EFNCRP00000008216
Elongation factor 3 (1056 aa)
       
 
  0.745
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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