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rpt-4 protein (Neurospora crassa) - STRING interaction network
"rpt-4" - Putative uncharacterized protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpt-4Putative uncharacterized protein (390 aa)    
Predicted Functional Partners:
rpn-8
26S proteasome regulatory subunit rpn-8 (352 aa)
     
  0.999
rpt-5
Putative uncharacterized protein (460 aa)
   
0.999
B10D6.220
26S protease regulatory subunit 7 (439 aa)
   
0.999
rpn-7
Putative uncharacterized protein (492 aa)
     
  0.999
B13D24.220
Probable 26S proteasome regulatory particle chain RPT3 (421 aa)
   
0.999
rpn-3
Putative uncharacterized protein (552 aa)
     
  0.999
8D4.170
26S protease regulatory subunit 4 (459 aa)
   
0.999
B1D4.170
Probable 26S protease subunit RPT6 (389 aa)
   
0.999
pca-3
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (251 aa)
     
  0.999
pcb-4
Probable proteasome subunit beta type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (240 aa)
     
  0.999
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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