STRINGSTRING
set-7 protein (Neurospora crassa) - STRING interaction network
"set-7" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
set-7Predicted protein (2140 aa)    
Predicted Functional Partners:
EFNCRP00000005023
Predicted protein (622 aa)
     
  0.970
cac-3
Histone acetyltransferase type B subunit 2 (446 aa)
     
  0.936
cel-1
Fatty acid synthase alpha subunit reductase (1864 aa)
       
      0.898
EFNCRP00000007111
Predicted protein (605 aa)
     
  0.864
hda-2
Histone deacetylase phd1 (499 aa)
   
  0.801
dim-2
Cytosine-specific methyltransferase (1454 aa)
     
  0.781
EFNCRP00000003630
41 kDa peptidyl-prolyl cis-trans isomerase (375 aa)
     
  0.779
hda-3
Histone deacetylase RPD3 (646 aa)
   
  0.778
hH3
Histone H3 (136 aa)
       
  0.758
EFNCRP00000007059
Putative uncharacterized protein (581 aa)
     
  0.716
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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