STRINGSTRING
mus-40 protein (Neurospora crassa) - STRING interaction network
"mus-40" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mus-40Putative uncharacterized protein (1269 aa)    
Predicted Functional Partners:
EFNCRP00000006580
Putative RNA polymerase II transcription factor B subunit 1 (663 aa)
     
  0.970
B8J22.130
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.961
mus-53
DNA ligase 4 (1046 aa)
     
  0.924
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
   
  0.909
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
   
  0.890
mei-3
DNA repair protein RAD51 (353 aa)
   
  0.843
msh2
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR) (937 aa)
   
  0.840
mus-38
Putative uncharacterized protein (957 aa)
     
  0.836
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.835
EFNCRP00000007371
Crossover junction endonuclease mus-81 (645 aa)
     
  0.813
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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