STRINGSTRING
csb protein (Neurospora crassa) - STRING interaction network
"csb" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csbPutative uncharacterized protein (1150 aa)    
Predicted Functional Partners:
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
     
  0.960
EFNCRP00000006198
Putative uncharacterized protein (332 aa)
     
 
  0.870
B15B3.200
Putative uncharacterized protein (138 aa)
       
 
  0.856
mus-40
Putative uncharacterized protein (1269 aa)
     
  0.812
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.792
B24N4.100
Putative uncharacterized protein (435 aa)
       
  0.788
crf4-1
Chromatin remodelling complex ATPase chain ISW1 (1126 aa)
   
0.763
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.756
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.756
ngf-1
Histone acetyltransferase GCN5 (422 aa)
     
  0.727
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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