STRINGSTRING
xyk-1 protein (Neurospora crassa) - STRING interaction network
"xyk-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xyk-1Putative uncharacterized protein (576 aa)    
Predicted Functional Partners:
EFNCRP00000000677
Putative uncharacterized protein (383 aa)
   
 
  0.987
EFNCRP00000000800
Ribulose-phosphate 3-epimerase (251 aa)
       
  0.934
EFNCRP00000000635
Putative uncharacterized protein (363 aa)
   
 
  0.704
EFNCRP00000008911
Putative uncharacterized protein (455 aa)
   
 
  0.703
EFNCRP00000007012
Putative uncharacterized protein (437 aa)
   
 
  0.703
EFNCRP00000001322
Putative uncharacterized protein (383 aa)
   
 
  0.703
EFNCRP00000000399
Putative uncharacterized protein (364 aa)
   
 
  0.703
xr
Xylose reductase (322 aa)
   
 
  0.658
12F11.090
Probable TRANSKETOLASE; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (686 aa)
   
 
  0.639
EFNCRP00000001225
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (324 aa)
   
 
  0.636
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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