STRINGSTRING
EFNCRP00000007533 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000007533" - Vacuolar protein 8 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000007533Vacuolar protein 8 (578 aa)    
Predicted Functional Partners:
EFNCRP00000004490
Predicted protein (1028 aa)
       
  0.912
EFNCRP00000004011
Palmitoyltransferase PFA3 (598 aa)
     
 
  0.583
apg-1
Serine/threonine-protein kinase atg-1 (932 aa)
     
 
  0.548
5F3.080
Putative uncharacterized protein (170 aa)
       
      0.529
EFNCRP00000008014
Vacuolar membrane-associated protein iml-1 (2083 aa)
       
      0.515
B24G3.100
Putative uncharacterized protein (944 aa)
     
        0.460
EFNCRP00000005668
Putative uncharacterized protein (1359 aa)
     
   
  0.422
EFNCRP00000002731
Autophagy-related protein 18 (461 aa)
     
   
  0.419
EFNCRP00000003264
Putative uncharacterized protein (858 aa)
     
 
  0.413
EFNCRP00000009736
Autophagy-related protein 11 (1300 aa)
           
  0.406
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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