STRINGSTRING
rib-3 protein (Neurospora crassa) - STRING interaction network
"rib-3" - Putative uncharacterized protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rib-3Putative uncharacterized protein (509 aa)    
Predicted Functional Partners:
EFNCRP00000004218
Putative uncharacterized protein (490 aa)
   
  0.970
EFNCRP00000009456
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (203 aa)
   
 
  0.880
EFNCRP00000008432
Putative uncharacterized protein (321 aa)
   
  0.805
EFNCRP00000005962
Putative uncharacterized protein (227 aa)
   
   
  0.729
EFNCRP00000009473
Putative uncharacterized protein (420 aa)
     
        0.676
EFNCRP00000001471
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (236 aa)
     
 
  0.653
his-3
Histidine biosynthesis trifunctional protein (870 aa)
         
  0.622
rib-5
Riboflavin synthase alpha chain (255 aa)
   
 
  0.598
EFNCRP00000008250
Putative uncharacterized protein (270 aa)
   
        0.572
EFNCRP00000005515
Putative uncharacterized protein (229 aa)
   
 
  0.505
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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