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rps-1 protein (Neurospora crassa) - STRING interaction network
"rps-1" - 40S ribosomal protein S1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps-140S ribosomal protein S1 (256 aa)    
Predicted Functional Partners:
EFNCRP00000009280
40S ribosomal protein S5 (213 aa)
     
  0.999
B11B22.020
Ribosomal protein S8 (202 aa)
     
  0.999
EFNCRP00000001214
40S ribosomal protein S4 (261 aa)
   
  0.999
EFNCRP00000005384
40S ribosomal protein S2 (265 aa)
     
  0.999
rps-0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (290 aa)
   
  0.999
EFNCRP00000002377
40S ribosomal protein S13 (151 aa)
   
  0.999
EFNCRP00000008457
40S ribosomal protein S6 (239 aa)
   
  0.999
crp-3
40S ribosomal protein S17 (146 aa)
     
  0.999
93G11.150
60S ribosomal protein L4-A (361 aa)
   
  0.999
crp-10
Cytoplasmic ribosomal protein subunit S3 (262 aa)
     
  0.999
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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