STRINGSTRING
ser-7 protein (Neurospora crassa) - STRING interaction network
"ser-7" - Phosphoserine aminotransferase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ser-7Phosphoserine aminotransferase (429 aa)    
Predicted Functional Partners:
EFNCRP00000007555
D-3-phosphoglycerate dehydrogenase 1 (466 aa)
   
  0.999
EFNCRP00000000782
Putative uncharacterized protein (361 aa)
   
  0.978
B15B3.080
Putative uncharacterized protein (496 aa)
   
 
  0.973
B11B23.200
Probable threonine synthase (553 aa)
     
  0.925
B10H4.100
Pre-mRNA splicing factor cwc2 (415 aa)
       
      0.898
EFNCRP00000009527
Putative uncharacterized protein (315 aa)
   
  0.887
EFNCRP00000004908
Putative uncharacterized protein (411 aa)
   
  0.887
EFNCRP00000001538
Predicted protein (379 aa)
   
  0.887
aro-1
Pentafunctional AROM polypeptide; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
   
   
  0.815
EFNCRP00000004668
Arginyl-tRNA synthetase (640 aa)
     
   
  0.689
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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