STRINGSTRING
B20D17.110 protein (Neurospora crassa) - STRING interaction network
"B20D17.110" - Nucleosome assembly protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B20D17.110Nucleosome assembly protein (407 aa)    
Predicted Functional Partners:
EFNCRP00000006352
Putative uncharacterized protein (1031 aa)
     
 
  0.940
hH2Az
Histone H2A.Z (143 aa)
     
 
  0.938
hH2A
Histone H2A (134 aa)
       
 
  0.932
EFNCRP00000002033
G2/mitotic-specific cyclin-B (515 aa)
       
 
  0.890
hH2B
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
 
  0.890
EFNCRP00000008457
40S ribosomal protein S6 (239 aa)
     
 
  0.849
93G11.020
Putative uncharacterized protein (328 aa)
     
 
  0.795
gsk-3
Glycogen synthase kinase-3 (394 aa)
       
 
  0.748
EFNCRP00000007587
Putative uncharacterized protein (106 aa)
 
            0.720
B20D17.130
Putative uncharacterized protein (1442 aa)
 
   
 
  0.691
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (9%) [HD]