STRINGSTRING
nst-7 protein (Neurospora crassa) - STRING interaction network
"nst-7" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nst-7Predicted protein (437 aa)    
Predicted Functional Partners:
hda-4
Putative uncharacterized protein (1073 aa)
   
  0.718
nst-5
Putative uncharacterized protein (258 aa)
   
     
  0.706
hda-1
Putative uncharacterized protein (738 aa)
   
  0.673
hda-2
Histone deacetylase phd1 (499 aa)
   
  0.655
hda-3
Histone deacetylase RPD3 (646 aa)
   
  0.618
nst-4
Predicted protein (1327 aa)
     
   
  0.604
EFNCRP00000002207
60S ribosomal protein L35 (125 aa)
       
      0.578
set-7
Predicted protein (2140 aa)
       
  0.575
hat-4
Histone acetyltransferase esa-1 (506 aa)
     
 
  0.561
hat-6
Putative uncharacterized protein (1135 aa)
     
 
  0.560
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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