STRINGSTRING
bdp-3 protein (Neurospora crassa) - STRING interaction network
"bdp-3" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bdp-3Predicted protein (1081 aa)    
Predicted Functional Partners:
EFNCRP00000003170
Predicted protein (836 aa)
     
  0.973
EFNCRP00000002817
Predicted protein (563 aa)
     
  0.944
EFNCRP00000003699
SWR1-complex protein 4 (733 aa)
     
 
  0.937
crf1-1
Helicase swr-1 (1845 aa)
     
 
  0.919
EFNCRP00000009294
Putative uncharacterized protein (1395 aa)
         
    0.900
EFNCRP00000000220
Protein AF-9 homolog (309 aa)
     
  0.848
arp-4
Actin-related protein 4 (469 aa)
     
  0.828
EFNCRP00000006818
RuvB-like helicase 2; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (481 aa)
     
 
  0.768
EFNCRP00000002514
RuvB-like helicase 1; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (458 aa)
     
 
  0.765
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
     
  0.758
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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