STRINGSTRING
qde-1 protein (Neurospora crassa) - STRING interaction network
"qde-1" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qde-1Predicted protein (1402 aa)    
Predicted Functional Partners:
dcl-1
Dicer-like protein 1 (1584 aa)
     
 
  0.848
qde-2
Putative uncharacterized protein (1089 aa)
     
   
  0.763
dcl-2
Dicer-like protein 2 (1421 aa)
     
 
  0.762
qde-3
Putative uncharacterized protein (1955 aa)
           
  0.750
EFNCRP00000000152
Predicted protein (568 aa)
           
  0.710
B17C10.130
Related to Ribonuclease III (352 aa)
     
 
  0.681
EFNCRP00000008429
Putative uncharacterized protein (439 aa)
       
 
  0.678
sad-2
Predicted protein (986 aa)
           
  0.643
Sms-2
Predicted protein (989 aa)
     
   
  0.624
B11H24.130
Probable single-stranded DNA-binding protein 68k chain (610 aa)
           
  0.573
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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