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ccr4 protein (Neurospora crassa) - STRING interaction network
"ccr4" - Glucose-repressible alcohol dehydrogenase transcriptional effector in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccr4Glucose-repressible alcohol dehydrogenase transcriptional effector (786 aa)    
Predicted Functional Partners:
H4H7.010
Related to CDC39 protein (2098 aa)
     
  0.993
EFNCRP00000008951
CCR4-NOT transcription complex subunit 7 (572 aa)
     
  0.992
EFNCRP00000003574
Putative uncharacterized protein (640 aa)
     
  0.975
EFNCRP00000006914
Cell differentiation protein rcd1 (356 aa)
     
  0.975
EFNCRP00000008011
Putative uncharacterized protein (396 aa)
     
  0.973
EFNCRP00000003534
Putative uncharacterized protein (1673 aa)
     
  0.972
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
  0.894
EFNCRP00000004477
Polyadenylate-binding protein, cytoplasmic and nuclear; Binds the poly(A) tail of mRNA (764 aa)
       
  0.871
B16D18.140
Putative uncharacterized protein (606 aa)
       
  0.870
EFNCRP00000003630
41 kDa peptidyl-prolyl cis-trans isomerase (375 aa)
     
  0.835
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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