STRINGSTRING
pco-1 protein (Neurospora crassa) - STRING interaction network
"pco-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco-1Putative uncharacterized protein (1006 aa)    
Predicted Functional Partners:
pyr-3
Protein pyrABCN (1832 aa)
     
   
  0.742
stk-47
Putative uncharacterized protein (525 aa)
     
      0.605
myo2
Putative uncharacterized protein (2401 aa)
     
        0.589
EFNCRP00000009751
Predicted protein (1283 aa)
     
        0.525
B13D24.060
Related to transcription regulator SPT7 (1172 aa)
     
        0.464
13E11.260
Putative uncharacterized protein 13E11.260 (935 aa)
     
 
  0.447
EFNCRP00000006173
Predicted protein (1141 aa)
     
        0.443
B17B1.120
Predicted protein (938 aa)
     
        0.438
EFNCRP00000003838
Putative uncharacterized protein (357 aa)
     
   
  0.420
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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