STRINGSTRING
sre protein (Neurospora crassa) - STRING interaction network
"sre" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srePredicted protein (587 aa)    
Predicted Functional Partners:
EFNCRP00000005402
Putative uncharacterized protein (114 aa)
       
 
  0.834
EFNCRP00000001082
Putative uncharacterized protein (126 aa)
       
 
  0.721
sah-1
Putative uncharacterized protein (507 aa)
       
  0.640
cre-1
DNA-binding protein cre-1 (430 aa)
     
  0.636
pp-1
Ste12-like transcription factor (722 aa)
       
  0.635
EFNCRP00000000438
pH-response transcription factor pacC/RIM101 (621 aa)
     
  0.619
EFNCRP00000009593
Predicted protein (1291 aa)
       
  0.608
EFNCRP00000009205
Putative uncharacterized protein (1159 aa)
       
  0.608
EFNCRP00000009155
Predicted protein (845 aa)
       
  0.608
EFNCRP00000008693
Predicted protein (263 aa)
       
  0.608
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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