STRINGSTRING
rbg-40 protein (Neurospora crassa) - STRING interaction network
"rbg-40" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbg-40Putative uncharacterized protein (404 aa)    
Predicted Functional Partners:
B5O22.240
Putative uncharacterized protein B5O22.240 (817 aa)
     
  0.989
EFNCRP00000008161
Putative uncharacterized protein (257 aa)
     
  0.981
EFNCRP00000008418
Putative uncharacterized protein (433 aa)
     
  0.975
2E4.140
Probable component of the U3 small nucleolar ribonucleoprotein (295 aa)
     
 
  0.974
EFNCRP00000008824
Putative uncharacterized protein (459 aa)
     
  0.970
EFNCRP00000007018
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (320 aa)
     
  0.946
B7A16.140
Putative uncharacterized protein (417 aa)
     
  0.933
EFNCRP00000008113
Dimethyladenosine transferase (398 aa)
     
 
  0.931
ck-1a
Casein kinase I isoform delta (361 aa)
     
  0.914
EFNCRP00000008633
Putative uncharacterized protein (341 aa)
     
   
  0.892
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (7%) [HD]