STRINGSTRING
EFNCRP00000008050 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000008050" - ATP-dependent RNA helicase dbp-10 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000008050ATP-dependent RNA helicase dbp-10 (934 aa)    
Predicted Functional Partners:
spb-1
AdoMet-dependent rRNA methyltransferase spb-1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (831 aa)
     
 
  0.998
EFNCRP00000005096
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.998
EFNCRP00000000021
ATP-dependent RNA helicase drs-1 (857 aa)
   
 
0.998
EFNCRP00000005226
ATP-dependent RNA helicase dbp-4 (823 aa)
   
 
0.998
EFNCRP00000002958
Putative uncharacterized protein (550 aa)
     
 
  0.997
EFNCRP00000000090
Putative uncharacterized protein (676 aa)
     
      0.997
EFNCRP00000001237
Putative uncharacterized protein (790 aa)
     
      0.997
EFNCRP00000002202
Putative uncharacterized protein (746 aa)
     
 
  0.996
nop-7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (663 aa)
     
 
  0.996
EFNCRP00000005961
Putative uncharacterized protein (772 aa)
     
 
  0.995
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (11%) [HD]