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rpn-1 protein (Neurospora crassa) - STRING interaction network
"rpn-1" - 26S proteasome regulatory subunit rpn-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpn-126S proteasome regulatory subunit rpn-1 (902 aa)    
Predicted Functional Partners:
rpn-3
Putative uncharacterized protein (552 aa)
     
  0.999
rpn-2
Putative uncharacterized protein (1188 aa)
     
0.998
8D4.170
26S protease regulatory subunit 4 (459 aa)
     
  0.998
rpn-7
Putative uncharacterized protein (492 aa)
     
  0.995
EFNCRP00000001227
Ubiquitin carboxyl-terminal hydrolase (548 aa)
     
  0.995
B2O8.210
Probable 26s proteasome p44.5 protein (424 aa)
     
  0.995
rpt-5
Putative uncharacterized protein (460 aa)
     
  0.995
rpn-11
26S proteasome regulatory subunit (338 aa)
     
  0.994
rpt-4
Putative uncharacterized protein (390 aa)
     
  0.994
B7F18.190
Probable multiubiquitin chain binding protein (MBP1) (303 aa)
     
  0.994
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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