STRINGSTRING
EFNCRP00000008107 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000008107" - Putative uncharacterized protein in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000008107Putative uncharacterized protein (468 aa)    
Predicted Functional Partners:
EFNCRP00000001095
Putative uncharacterized protein (630 aa)
     
  0.819
mus-38
Putative uncharacterized protein (957 aa)
     
 
  0.679
mei-3
DNA repair protein RAD51 (353 aa)
       
 
  0.647
mus-40
Putative uncharacterized protein (1269 aa)
   
 
  0.635
EFNCRP00000003056
DNA-repair protein rad2; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts a [...] (396 aa)
   
 
  0.611
EFNCRP00000009813
Putative uncharacterized protein (490 aa)
       
 
  0.537
nth-1
Putative uncharacterized protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (815 aa)
       
 
  0.514
upr-1
DNA polymerase (1926 aa)
     
 
  0.482
EFNCRP00000001114
Predicted protein (572 aa)
       
 
  0.443
B17C10.030
Related to RAD57 protein (510 aa)
       
 
  0.418
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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