STRINGSTRING
pgk protein (Neurospora crassa) - STRING interaction network
"pgk" - Phosphoglycerate kinase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgkPhosphoglycerate kinase (418 aa)    
Predicted Functional Partners:
gpd-1
Glyceraldehyde 3-phosphate-dehydrogenase (338 aa)
   
  0.999
EFNCRP00000007877
Triosephosphate isomerase (248 aa)
  0.999
emp-7
Enolase (438 aa)
 
  0.998
EFNCRP00000001328
Enolase (418 aa)
 
  0.997
29E8.160
Putative uncharacterized protein (281 aa)
  0.996
B13D24.320
Probable phosphoglyceromutase (519 aa)
   
 
  0.986
fba
Fructose-bisphosphate aldolase (362 aa)
   
  0.982
gpi-1
Glucose-6-phosphate isomerase (561 aa)
   
   
  0.977
29E8.130
Related to fructose-bisphosphate aldolase (288 aa)
   
  0.967
EFNCRP00000001278
Putative uncharacterized protein (212 aa)
   
 
  0.949
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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