STRINGSTRING
B2E7.030 protein (Neurospora crassa) - STRING interaction network
"B2E7.030" - Related to small nuclear ribonucleoprotein snRNP U1A in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2E7.030Related to small nuclear ribonucleoprotein snRNP U1A (247 aa)    
Predicted Functional Partners:
EFNCRP00000006315
U2 small nuclear ribonucleoprotein A’ (252 aa)
     
  0.983
EFNCRP00000007848
Predicted protein (415 aa)
     
  0.972
EFNCRP00000004443
Putative uncharacterized protein (497 aa)
     
  0.972
EFNCRP00000000695
Small nuclear ribonucleoprotein Sm D1 (123 aa)
     
  0.970
EFNCRP00000003517
Small nuclear ribonucleoprotein Sm D2 (119 aa)
     
  0.969
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
  0.968
EFNCRP00000002417
U2 snRNP component prp10 (1215 aa)
     
  0.966
B8B20.080
Related to SPLICEOSOME ASSOCIATED PROTEIN 145 (629 aa)
     
  0.965
EFNCRP00000001835
Probable small nuclear ribonucleoprotein F (90 aa)
     
  0.963
EFNCRP00000002157
Predicted protein (213 aa)
     
  0.962
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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