STRINGSTRING
msh6 protein (Neurospora crassa) - STRING interaction network
"msh6" - DNA mismatch repair protein msh6 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msh6DNA mismatch repair protein msh6; Component of the post-replicative DNA mismatch repair system (MMR) (1237 aa)    
Predicted Functional Partners:
B8J22.130
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.993
msh2
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR) (937 aa)
   
0.991
mlh-1
Putative uncharacterized protein (751 aa)
 
  0.957
EFNCRP00000007530
DNA polymerase (1479 aa)
     
 
  0.923
EFNCRP00000005439
DNA polymerase (2262 aa)
     
 
  0.922
B2N18.120
Putative uncharacterized protein (894 aa)
   
  0.920
mlh-2
Predicted protein (772 aa)
   
  0.893
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
   
 
  0.877
msh3
DNA mismatch repair protein msh-3; Component of the post-replicative DNA mismatch repair system (MMR) (1145 aa)
   
 
 
0.877
EFNCRP00000006558
Predicted protein (867 aa)
   
  0.868
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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