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pdx-4 protein (Neurospora crassa) - STRING interaction network
"pdx-4" - Pyridoxamine 5'-phosphate oxidase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdx-4Pyridoxamine 5’-phosphate oxidase (265 aa)    
Predicted Functional Partners:
EFNCRP00000009052
Putative uncharacterized protein (439 aa)
   
 
  0.956
pdx-2
Pyridoxine-2 (252 aa)
     
  0.939
pdx-1
Probable pyridoxine biosynthesis protein pdx-1 (308 aa)
     
  0.928
EFNCRP00000007300
Putative uncharacterized protein (329 aa)
         
  0.927
mig-9
Putative uncharacterized protein (328 aa)
         
  0.927
EFNCRP00000002360
Putative uncharacterized protein (329 aa)
         
  0.927
EFNCRP00000008562
Predicted protein (236 aa)
 
            0.645
ser-7
Phosphoserine aminotransferase (429 aa)
   
   
  0.498
rib-5
Riboflavin synthase alpha chain (255 aa)
     
   
  0.422
EFNCRP00000000294
Putative uncharacterized protein (523 aa)
           
  0.412
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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