STRINGSTRING
dcl-1 protein (Neurospora crassa) - STRING interaction network
"dcl-1" - Dicer-like protein 1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcl-1Dicer-like protein 1 (1584 aa)    
Predicted Functional Partners:
qde-2
Putative uncharacterized protein (1089 aa)
     
  0.991
Sms-2
Predicted protein (989 aa)
     
  0.985
qde-1
Predicted protein (1402 aa)
     
 
  0.848
93G11.080
Putative uncharacterized protein (525 aa)
     
 
  0.824
qde-3
Putative uncharacterized protein (1955 aa)
     
  0.819
EFNCRP00000003269
Putative uncharacterized protein (1146 aa)
     
  0.805
EFNCRP00000001726
Exportin-1 (1078 aa)
     
  0.805
G17B7.050
Putative uncharacterized protein (1204 aa)
     
      0.801
sad-1
Putative uncharacterized protein (1049 aa)
     
 
  0.791
hda-1
Putative uncharacterized protein (738 aa)
     
 
  0.783
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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