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EFNCRP00000008427 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000008427" - Predicted protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000008427Predicted protein (958 aa)    
Predicted Functional Partners:
EFNCRP00000000436
Putative uncharacterized protein (1279 aa)
     
  0.988
EFNCRP00000006204
Predicted protein (489 aa)
     
  0.981
G17A4.140
Related to Pol II transcription elongation factor (601 aa)
     
  0.976
EFNCRP00000006729
Transcription elongation factor spt-5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1052 aa)
     
  0.973
EFNCRP00000002633
Putative uncharacterized protein (333 aa)
     
  0.967
EFNCRP00000004253
FACT complex subunit spt-16 (1042 aa)
     
  0.915
EFNCRP00000003630
41 kDa peptidyl-prolyl cis-trans isomerase (375 aa)
     
  0.868
EFNCRP00000000458
FACT complex subunit pob-3 (565 aa)
     
  0.861
EFNCRP00000001111
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1752 aa)
     
  0.859
ckb-1
Casein kinase II subunit beta-1; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (333 aa)
     
      0.767
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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