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ypt-1 protein (Neurospora crassa) - STRING interaction network
"ypt-1" - GTP-binding protein ypt1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypt-1GTP-binding protein ypt1 (203 aa)    
Predicted Functional Partners:
EFNCRP00000005661
Trafficking protein particle complex subunit 3 (148 aa)
     
  0.967
EFNCRP00000004945
Rab GDP-dissociation inhibitor (465 aa)
     
 
  0.939
EFNCRP00000006163
GTP-binding protein SAS1 (205 aa)
   
 
0.916
EFNCRP00000002953
Putative uncharacterized protein (490 aa)
     
 
  0.901
B10H4.100
Pre-mRNA splicing factor cwc2 (415 aa)
       
 
  0.900
EFNCRP00000006042
Putative uncharacterized protein (180 aa)
     
  0.887
EFNCRP00000008781
Putative uncharacterized protein (225 aa)
       
  0.853
B7F18.180
Putative uncharacterized protein (129 aa)
       
  0.851
B13I18.10
Predicted protein (1171 aa)
     
  0.834
EFNCRP00000003880
Putative uncharacterized protein (362 aa)
     
  0.833
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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