STRINGSTRING
mus-23 protein (Neurospora crassa) - STRING interaction network
"mus-23" - Double-strand break repair protein mus-23 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mus-23Double-strand break repair protein mus-23 (786 aa)    
Predicted Functional Partners:
B13C5.130
Putative uncharacterized protein (1314 aa)
   
  0.995
mus-9
Putative uncharacterized protein (2066 aa)
     
  0.973
mus-51
ATP-dependent DNA helicase II subunit 1 (647 aa)
     
  0.970
EFNCRP00000000459
ATP-dependent DNA helicase II subunit 2 (670 aa)
     
  0.961
EFNCRP00000003056
DNA-repair protein rad2; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts a [...] (396 aa)
   
  0.944
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
     
  0.917
mei-3
DNA repair protein RAD51 (353 aa)
   
  0.915
EFNCRP00000005330
Putative uncharacterized protein (758 aa)
   
  0.901
EFNCRP00000000534
Predicted protein (944 aa)
     
  0.889
qde-3
Putative uncharacterized protein (1955 aa)
   
  0.886
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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