STRINGSTRING
phr protein (Neurospora crassa) - STRING interaction network
"phr" - Deoxyribodipyrimidine photo-lyase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phrDeoxyribodipyrimidine photo-lyase (642 aa)    
Predicted Functional Partners:
EFNCRP00000007616
Topoisomerase 1-associated factor 1 (1235 aa)
     
  0.777
ck-1a
Casein kinase I isoform delta (361 aa)
       
  0.708
cry
Putative cryptochrome DASH, mitochondrial (722 aa)
   
   
0.666
123A4.180
Probable GEL1 protein; Splits internally a 1,3-beta-glucan molecule and transfers the newly generated reducing end (the donor) to the non- reducing end of another 1,3-beta-glucan molecule (the acceptor) forming a 1,3-beta linkage, resulting in the elongation of 1,3- beta-glucan chains in the cell wall (457 aa)
           
  0.587
B24G20.120
Probable beta (1-3) glucanosyltransferase gel3p; Splits internally a 1,3-beta-glucan molecule and transfers the newly generated reducing end (the donor) to the non- reducing end of another 1,3-beta-glucan molecule (the acceptor) forming a 1,3-beta linkage, resulting in the elongation of 1,3- beta-glucan chains in the cell wall (542 aa)
           
  0.489
al-1
Phytoene dehydrogenase (595 aa)
   
   
  0.466
ung-1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (449 aa)
     
 
  0.454
dim-8
Putative uncharacterized protein (1158 aa)
       
 
  0.440
EFNCRP00000001674
Putative uncharacterized protein (539 aa)
 
          0.420
B23G1.140
Putative uncharacterized protein (1951 aa)
           
  0.400
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (8%) [HD]