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qde-3 protein (Neurospora crassa) - STRING interaction network
"qde-3" - Putative uncharacterized protein in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qde-3Putative uncharacterized protein (1955 aa)    
Predicted Functional Partners:
mus-9
Putative uncharacterized protein (2066 aa)
     
  0.978
mei-3
DNA repair protein RAD51 (353 aa)
     
  0.976
EFNCRP00000000390
Putative uncharacterized protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (638 aa)
   
  0.970
mus-50
Putative uncharacterized protein (850 aa)
   
 
  0.970
B11H24.130
Probable single-stranded DNA-binding protein 68k chain (610 aa)
     
  0.965
EFNCRP00000005330
Putative uncharacterized protein (758 aa)
   
  0.964
EFNCRP00000003056
DNA-repair protein rad2; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts a [...] (396 aa)
   
  0.963
EFNCRP00000006105
DNA topoisomerase 2 (1909 aa)
   
 
  0.959
mus-51
ATP-dependent DNA helicase II subunit 1 (647 aa)
     
 
  0.946
EFNCRP00000007371
Crossover junction endonuclease mus-81 (645 aa)
     
  0.946
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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