STRINGSTRING
crf2-1 protein (Neurospora crassa) - STRING interaction network
"crf2-1" - Putative DNA helicase ino-80 in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crf2-1Putative DNA helicase ino-80 (1942 aa)    
Predicted Functional Partners:
arp-4
Actin-related protein 4 (469 aa)
     
  0.979
EFNCRP00000006818
RuvB-like helicase 2; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (481 aa)
     
  0.971
EFNCRP00000003699
SWR1-complex protein 4 (733 aa)
     
  0.970
arp-8
Putative uncharacterized protein (748 aa)
     
  0.970
EFNCRP00000002514
RuvB-like helicase 1; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (458 aa)
     
  0.970
act
Actin (375 aa)
       
  0.963
arp-5
Putative uncharacterized protein (762 aa)
     
  0.958
EFNCRP00000005656
Actin-like protein arp-6 (446 aa)
     
  0.952
EFNCRP00000000452
Putative uncharacterized protein (277 aa)
       
 
  0.932
EFNCRP00000000220
Protein AF-9 homolog (309 aa)
       
  0.932
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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