STRINGSTRING
B8J22.220 protein (Neurospora crassa) - STRING interaction network
"B8J22.220" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8J22.220Predicted protein (716 aa)    
Predicted Functional Partners:
103E1.180
Predicted protein (448 aa)
     
  0.970
un-18
DNA-directed RNA polymerase I subunit RPA2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1234 aa)
     
  0.882
B7K22.060
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1701 aa)
     
  0.835
EFNCRP00000000155
Putative uncharacterized protein (156 aa)
       
  0.698
EFNCRP00000006247
Predicted protein (436 aa)
       
  0.687
EFNCRP00000005027
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (122 aa)
     
 
  0.682
EFNCRP00000004601
Probable TRANSCRIPTION INITIATION FACTOR TFIID (257 aa)
       
  0.667
EFNCRP00000002133
DNA-directed RNA polymerases I/II/III subunit 10 (84 aa)
         
  0.656
EFNCRP00000000209
DNA-directed RNA polymerases I (160 aa)
         
  0.656
B17C10.020
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1155 aa)
     
  0.576
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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