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EFNCRP00000009067 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000009067" - Putative uncharacterized protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000009067Putative uncharacterized protein (489 aa)    
Predicted Functional Partners:
EFNCRP00000007848
Predicted protein (415 aa)
     
  0.758
B10H4.100
Pre-mRNA splicing factor cwc2 (415 aa)
     
  0.698
12F11.220
Predicted protein; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (216 aa)
     
 
  0.697
EFNCRP00000006254
Negative regulator of differentiation 1 (798 aa)
     
  0.692
EFNCRP00000006982
Predicted protein (313 aa)
     
  0.692
EFNCRP00000007477
Predicted protein (417 aa)
     
  0.684
EFNCRP00000006494
Nucleolar protein 12 (594 aa)
     
  0.684
90C4.230
Putative uncharacterized protein (491 aa)
     
  0.684
EFNCRP00000003275
Predicted protein (400 aa)
     
  0.680
EFNCRP00000007171
Putative uncharacterized protein (247 aa)
     
    0.664
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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