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EFNCRP00000009337 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000009337" - ATP-dependent RNA helicase chl-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000009337ATP-dependent RNA helicase chl-1 (1073 aa)    
Predicted Functional Partners:
EFNCRP00000005533
Putative uncharacterized protein (475 aa)
     
  0.926
EFNCRP00000001975
Predicted protein (362 aa)
       
  0.923
EFNCRP00000006580
Putative RNA polymerase II transcription factor B subunit 1 (663 aa)
     
  0.902
B2F7.040
Probable cyclin-dependent ser/thr protein kinase KIN28 (407 aa)
     
  0.883
12F11.030
Predicted protein (353 aa)
     
  0.879
EFNCRP00000003660
Related to transcription initiation factor IIE, beta subunit (302 aa)
       
  0.870
EFNCRP00000001878
Related to transcription factor TFIIH chain p47 (416 aa)
     
  0.864
B2O8.310
Related to basic transcription factor 2 (35 kd SU) (439 aa)
     
  0.863
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
   
  0.844
EFNCRP00000002492
Predicted protein (345 aa)
     
    0.844
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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