STRINGSTRING
pex1 protein (Neurospora crassa) - STRING interaction network
"pex1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex1Putative uncharacterized protein (1247 aa)    
Predicted Functional Partners:
pex6
Peroxisomal biogenesis factor 6 (1381 aa)
     
0.980
B13O8.090
Predicted protein (433 aa)
     
  0.890
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
       
  0.773
pex12
Putative uncharacterized protein (446 aa)
     
 
  0.773
pex10
Putative uncharacterized protein (429 aa)
     
 
  0.772
B7H23.040
Putative uncharacterized protein (326 aa)
     
 
  0.771
pex13
Putative uncharacterized protein (451 aa)
     
 
  0.761
B17B1.170
Putative uncharacterized protein (382 aa)
     
  0.740
EFNCRP00000002053
Nuclear protein localization protein 4 (651 aa)
     
  0.733
EFNCRP00000000070
Putative uncharacterized protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (250 aa)
       
  0.719
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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