STRINGSTRING
stk-56 protein (Neurospora crassa) - STRING interaction network
"stk-56" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk-56Predicted protein (544 aa)    
Predicted Functional Partners:
20H10.100
Predicted protein (449 aa)
     
      0.912
B17C10.150
Putative uncharacterized protein B17C10.150 (776 aa)
     
      0.909
B13O8.210
Predicted protein (656 aa)
     
      0.905
EFNCRP00000009400
Putative uncharacterized protein (320 aa)
     
      0.900
EFNCRP00000005157
Predicted protein (1139 aa)
     
 
  0.899
stk-41
Predicted protein (248 aa)
     
 
  0.898
EFNCRP00000009521
Predicted protein (413 aa)
     
        0.896
EFNCRP00000007521
Putative uncharacterized protein (597 aa)
     
      0.896
EFNCRP00000007625
Predicted protein (221 aa)
     
      0.896
EFNCRP00000009799
Putative uncharacterized protein (356 aa)
     
        0.893
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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