Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMAC_00676 | SMAC_06999 | F7VMS2 | F7W504 | WGS project CABT00000000 data, contig 2.2. | WGS project CABT00000000 data, contig 2.29. | 0.631 |
SMAC_02542 | SMAC_06999 | F7VWS1 | F7W504 | WGS project CABT00000000 data, contig 2.11. | WGS project CABT00000000 data, contig 2.29. | 0.631 |
SMAC_05454 | SMAC_06999 | F7VSZ7 | F7W504 | WGS project CABT00000000 data, contig 2.6. | WGS project CABT00000000 data, contig 2.29. | 0.665 |
SMAC_06999 | SMAC_00676 | F7W504 | F7VMS2 | WGS project CABT00000000 data, contig 2.29. | WGS project CABT00000000 data, contig 2.2. | 0.631 |
SMAC_06999 | SMAC_02542 | F7W504 | F7VWS1 | WGS project CABT00000000 data, contig 2.29. | WGS project CABT00000000 data, contig 2.11. | 0.631 |
SMAC_06999 | SMAC_05454 | F7W504 | F7VSZ7 | WGS project CABT00000000 data, contig 2.29. | WGS project CABT00000000 data, contig 2.6. | 0.665 |