STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01458Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (385 aa)    
Predicted Functional Partners:
SMAC_00855
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
SMAC_03518
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.988
SMAC_06282
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.969
SMAC_04160
WGS project CABT00000000 data, contig 2.15.
   
 0.962
SMAC_02431
WGS project CABT00000000 data, contig 2.3.
   
 
 0.916
SMAC_08142
Aspartate aminotransferase.
   
 0.877
SMAC_00496
WGS project CABT00000000 data, contig 2.1.
  
0.859
SMAC_04615
ATP synthase subunit gamma.
   
 
 0.858
SMAC_07546
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.848
SMAC_01896
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.847
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.