STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y4C5_CIOSAUncharacterized protein. (3976 aa)    
Predicted Functional Partners:
H2Z2P4_CIOSA
Uncharacterized protein.
    
 0.739
H2Y5I3_CIOSA
Sema domain-containing protein.
    
 0.738
H2Y5W3_CIOSA
Sema domain-containing protein.
    
 0.738
H2Y5W4_CIOSA
Sema domain-containing protein.
    
 0.738
H2YQI4_CIOSA
Sema domain-containing protein.
    
 0.738
H2YUP9_CIOSA
Receptor protein-tyrosine kinase.
    
 0.678
H2ZG39_CIOSA
Pkinase_Tyr domain-containing protein.
    
 0.678
H2YD13_CIOSA
Tyrosine-protein kinase.
    
  0.644
H2YEW1_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.644
H2Z0H1_CIOSA
Protein kinase domain-containing protein.
    
  0.644
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.