STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YD77_CIOSAUncharacterized protein. (165 aa)    
Predicted Functional Partners:
H2Y6N5_CIOSA
Uncharacterized protein.
    
 0.814
H2YQ30_CIOSA
Uncharacterized protein.
   
 0.682
H2YC62_CIOSA
Uncharacterized protein.
    
 0.666
H2ZEG0_CIOSA
Uncharacterized protein.
    
 0.646
H2YPK1_CIOSA
Uncharacterized protein.
    
 0.627
H2Y4Q9_CIOSA
Tudor domain-containing protein.
    
 0.623
H2Z148_CIOSA
Uncharacterized protein.
   
  0.606
H2ZCD1_CIOSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.592
H2Y989_CIOSA
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
  0.588
H2YJC9_CIOSA
Uncharacterized protein.
    
  0.587
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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